Difference between revisions of "TSS:Hg 233737.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 6: | Line 6: | ||
|NS1-BP= | |NS1-BP= | ||
|NS1BP= | |NS1BP= | ||
| − | |all_trans= | + | |all_trans=HGNC:30313 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-35 |
| − | |end= | + | |end=19156830 |
|end_of_center_position=19156827 | |end_of_center_position=19156827 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=FLARA3 | + | |gene_alias=ARA3{{!}}FLARA3{{!}}HSPC068{{!}}KLHL39{{!}}ND1{{!}}NS-1{{!}}NS1-BP{{!}}NS1BP |
|gene_description=influenza virus NS1A binding protein | |gene_description=influenza virus NS1A binding protein | ||
| − | |gene_id= | + | |gene_id=23352 |
| − | |gene_name= | + | |gene_name=ubiquitin protein ligase E3 component n-recognin 4 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:30313 |
| − | |gene_symbol= | + | |gene_symbol=UBR4 |
| − | |gene_synonyms= | + | |gene_synonyms=KIAA0462 KIAA1307 RBAF600 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:30313 |
|nearest_ensembl=ENSG00000116679 | |nearest_ensembl=ENSG00000116679 | ||
|nearest_promoter_id=NM_006469 | |nearest_promoter_id=NM_006469 | ||
|nearest_refseq=NM_006469 | |nearest_refseq=NM_006469 | ||
|nearest_unigene=Hs.497183 | |nearest_unigene=Hs.497183 | ||
| − | |num_trans= | + | |num_trans=23352 |
|species=human | |species=human | ||
| − | |start= | + | |start=19156822 |
|start_of_center_position=19156826 | |start_of_center_position=19156826 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK056218 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_233737.1 | |tss_id=hg_233737.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:38, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19156826 |
|---|---|
| End of the center position in the TSS region: | 19156827 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK056218 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23352 |
| All_trans: | HGNC:30313 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Alias: | ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
