Difference between revisions of "TSS:Hg 106016.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=29958 |entrez_id=643161 |gc_percent=0.308458 |gene_alias=bA96C23.5 |gene_description=family with sequence similarity 25 member...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF384979:-45 MA620556:-45 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=-45 |
| + | |distance_to_tss=29953 | ||
| + | |end=87050247 | ||
| + | |end_of_center_position=87050247 | ||
|entrez_id=643161 | |entrez_id=643161 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001146157 | |nearest_refseq=NM_001146157 | ||
|nearest_unigene=Hs.729945 | |nearest_unigene=Hs.729945 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=87050246 | ||
| + | |start_of_center_position=87050246 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF384979 MA620556 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106016.1 | |tss_id=hg_106016.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:27, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 87050246 |
|---|---|
| End of the center position in the TSS region: | 87050247 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF384979 MA620556 |
|---|---|
| Distance: | -45 |
| Num_trans: | 2 |
| All_trans: | LF384979:-45 MA620556:-45 |
TATA-Box annotation
| Distance to TSS: | 29953 |
|---|---|
| Nearest PromoterID: | NM_001146157 |
| Entrez ID: | 643161 |
| Nearest Unigene: | Hs.729945 |
| Nearest Refseq: | NM_001146157 |
| Nearest Ensembl: | ENSG00000188100 |
| Gene Name: | FAM25A |
| Gene Alias: | bA96C23.5 |
| Gene Description: | family with sequence similarity 25 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
