Difference between revisions of "TSS:Hg 106087.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=5543 |entrez_id=59 |gc_percent=0.502488 |gene_alias=AAT6|ACTSA|MYMY5 |gene_description="actin, alpha 2, smooth muscle, aorta" |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ACTSA= | ||
| + | |MYMY5= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=5493 | ||
| + | |end=88947301 | ||
| + | |end_of_center_position=88947280 | ||
|entrez_id=59 | |entrez_id=59 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias= | + | |gene_alias=ACTSA |
| − | |gene_description= | + | |gene_description=actin alpha 2, smooth muscle |
|gene_name=ACTA2 | |gene_name=ACTA2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_001613 | |nearest_refseq=NM_001613 | ||
|nearest_unigene=Hs.500483 | |nearest_unigene=Hs.500483 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=88947258 | ||
| + | |start_of_center_position=88947279 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106087.1 | |tss_id=hg_106087.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88947279 |
|---|---|
| End of the center position in the TSS region: | 88947280 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 5493 |
|---|---|
| Nearest PromoterID: | NM_001613 |
| Entrez ID: | 59 |
| Nearest Unigene: | Hs.500483 |
| Nearest Refseq: | NM_001613 |
| Nearest Ensembl: | ENSG00000107796 |
| Gene Name: | ACTA2 |
| Gene Alias: | ACTSA |
| Gene Description: | actin alpha 2, smooth muscle |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
