Difference between revisions of "TSS:Hg 140860.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000541158.6:-42 uc059dxz.1:-42 ENST00000557096.1:-96 uc059dxy.1:-96 AK303378:278 ENST00000342443.10:344 uc001xvc.4:344 BC024205:344 ENST0000029817...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |LGR3= |
| + | |all_trans=HGNC:12373 | ||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-42 | |distance=-42 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-535 |
|end=80955087 | |end=80955087 | ||
| + | |end_of_center_position=80955086 | ||
|entrez_id=7253 | |entrez_id=7253 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=CHNG1 | + | |gene_alias=CHNG1{{!}}LGR3{{!}}hTSHR-I |
|gene_description=thyroid stimulating hormone receptor | |gene_description=thyroid stimulating hormone receptor | ||
|gene_id=7253 | |gene_id=7253 | ||
| Line 16: | Line 18: | ||
|gene_synonyms=LGR3 | |gene_synonyms=LGR3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hTSHR-I= | ||
|hgnc_mgi_id=HGNC:12373 | |hgnc_mgi_id=HGNC:12373 | ||
|nearest_ensembl=ENSG00000165409 | |nearest_ensembl=ENSG00000165409 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_000369 | |nearest_refseq=NM_000369 | ||
|nearest_unigene=Hs.160411 | |nearest_unigene=Hs.160411 | ||
| − | |num_trans= | + | |num_trans=7253 |
|species=human | |species=human | ||
|start=80955084 | |start=80955084 | ||
| + | |start_of_center_position=80955085 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000541158.6 | + | |transcript_name=ENST00000541158.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_140860.1 | |tss_id=hg_140860.1 | ||
Latest revision as of 08:22, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 80955085 |
|---|---|
| End of the center position in the TSS region: | 80955086 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000541158.6 |
|---|---|
| Distance: | -42 |
| Num_trans: | 7253 |
| All_trans: | HGNC:12373 |
TATA-Box annotation
| Distance to TSS: | -535 |
|---|---|
| Nearest PromoterID: | NM_001018036 |
| Entrez ID: | 7253 |
| Nearest Unigene: | Hs.160411 |
| Nearest Refseq: | NM_000369 |
| Nearest Ensembl: | ENSG00000165409 |
| Gene Name: | thyroid stimulating hormone receptor |
| Gene Alias: | CHNG1|LGR3|hTSHR-I |
| Gene Description: | thyroid stimulating hormone receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
