Difference between revisions of "TSS:Hg 237601.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NY-REN-24= | |NY-REN-24= | ||
| − | |all_trans= | + | |all_trans=HGNC:2936 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=148 |
| − | |distance_to_tss= | + | |distance_to_tss=5819 |
| − | |end= | + | |end=45786772 |
|end_of_center_position=45786772 | |end_of_center_position=45786772 | ||
|entrez_id=58509 | |entrez_id=58509 | ||
|fSAPc= | |fSAPc= | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=C19orf29 | + | |gene_alias=C19orf29{{!}}NY-REN-24{{!}}fSAPc |
| − | |gene_description= | + | |gene_description=cactin, spliceosome C complex subunit |
| − | |gene_id= | + | |gene_id=1762 |
| − | |gene_name= | + | |gene_name=DM1 locus, WD repeat containing |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:2936 |
| − | |gene_symbol= | + | |gene_symbol=DMWD |
| − | |gene_synonyms= | + | |gene_synonyms=D19S593E DMR-N9 gene59 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:2936 |
|nearest_ensembl=ENSG00000105298 | |nearest_ensembl=ENSG00000105298 | ||
|nearest_promoter_id=NM_001080543 | |nearest_promoter_id=NM_001080543 | ||
|nearest_refseq=NM_021231 | |nearest_refseq=NM_021231 | ||
|nearest_unigene=Hs.128425 | |nearest_unigene=Hs.128425 | ||
| − | |num_trans= | + | |num_trans=1762 |
|species=human | |species=human | ||
| − | |start= | + | |start=45786771 |
|start_of_center_position=45786771 | |start_of_center_position=45786771 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC019266 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_237601.1 | |tss_id=hg_237601.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 13:03, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45786771 |
|---|---|
| End of the center position in the TSS region: | 45786772 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC019266 |
|---|---|
| Distance: | 148 |
| Num_trans: | 1762 |
| All_trans: | HGNC:2936 |
TATA-Box annotation
| Distance to TSS: | 5819 |
|---|---|
| Nearest PromoterID: | NM_001080543 |
| Entrez ID: | 58509 |
| Nearest Unigene: | Hs.128425 |
| Nearest Refseq: | NM_021231 |
| Nearest Ensembl: | ENSG00000105298 |
| Gene Name: | DM1 locus, WD repeat containing |
| Gene Alias: | C19orf29|NY-REN-24|fSAPc |
| Gene Description: | cactin, spliceosome C complex subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
