Difference between revisions of "TSS:Hg 3073.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|NFI-A= | |NFI-A= | ||
|NFI-L= | |NFI-L= | ||
| − | |all_trans=ENST00000407417.7 | + | |all_trans=NM_001145511:0 ENST00000407417.7:26 AK299289:26 AK092769:-101 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=61077248 | |end=61077248 | ||
|end_of_center_position=61077234 | |end_of_center_position=61077234 | ||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=CTF | + | |gene_alias=BRMUTD{{!}}CTF{{!}}NF-I/A{{!}}NF1-A{{!}}NFI-A{{!}}NFI-L |
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_id=4774 | |gene_id=4774 | ||
| − | |gene_name=nuclear factor I | + | |gene_name=nuclear factor I A |
|gene_source=HGNC:7784 | |gene_source=HGNC:7784 | ||
|gene_symbol=NFIA | |gene_symbol=NFIA | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_005595 | |nearest_refseq=NM_005595 | ||
|nearest_unigene=Hs.740757 | |nearest_unigene=Hs.740757 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=61077219 | |start=61077219 | ||
|start_of_center_position=61077233 | |start_of_center_position=61077233 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001145511.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_3073.1 | |tss_id=hg_3073.1 | ||
Latest revision as of 17:41, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 61077233 |
|---|---|
| End of the center position in the TSS region: | 61077234 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001145511.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_001145511:0 ENST00000407417.7:26 AK299289:26 AK092769:-101 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001145511 |
| Entrez ID: | 4774 |
| Nearest Unigene: | Hs.740757 |
| Nearest Refseq: | NM_005595 |
| Nearest Ensembl: | ENSG00000162599 |
| Gene Name: | nuclear factor I A |
| Gene Alias: | BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L |
| Gene Description: | nuclear factor I A |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
