Difference between revisions of "TSS:Mm 30918.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|D4Abb1e= | |D4Abb1e= | ||
|Gm135= | |Gm135= | ||
| − | |all_trans= | + | |all_trans=MGI:1926159 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 13: | Line 13: | ||
|entrez_id=100019 | |entrez_id=100019 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=4833432B22Rik | + | |gene_alias=4833432B22Rik{{!}}A130070M06{{!}}AA958993{{!}}D4Abb1e{{!}}Gm135 |
|gene_description=midasin AAA ATPase 1 | |gene_description=midasin AAA ATPase 1 | ||
|gene_id=100019 | |gene_id=100019 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_133874 | |nearest_refseq=NM_133874 | ||
|nearest_unigene=Mm.24627 | |nearest_unigene=Mm.24627 | ||
| − | |num_trans= | + | |num_trans=100019 |
|species=mouse | |species=mouse | ||
|start=32657107 | |start=32657107 | ||
|start_of_center_position=32657136 | |start_of_center_position=32657136 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000071642.10 ENSMUST00000178134 | + | |transcript_name=ENSMUST00000071642.10 ENSMUST00000178134.1 AK144722 AK164449 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_30918.1 | |tss_id=mm_30918.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A2ANY6 J3QMC5 Q3TPE2 | + | |uniprot_id=A2ANY6 J3QMC5 Q3TPE2 |
}} | }} | ||
Latest revision as of 18:17, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 32657136 |
|---|---|
| End of the center position in the TSS region: | 32657137 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000071642.10 ENSMUST00000178134.1 AK144722 AK164449 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100019 |
| All_trans: | MGI:1926159 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001081392 |
| Entrez ID: | 100019 |
| Nearest Unigene: | Mm.24627 |
| Nearest Refseq: | NM_133874 |
| Nearest Ensembl: | ENSMUSG00000058006 |
| Gene Name: | midasin AAA ATPase 1 |
| Gene Alias: | 4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135 |
| Gene Description: | midasin AAA ATPase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
