Difference between revisions of "TSS:Hg 106288.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=9312 |entrez_id=5950 |gc_percent=0.40796 |gene_alias=MCOPCB10|RDCCAS |gene_description=retinol binding protein 4 |gene_name=RBP4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RDCCAS= | ||
| + | |all_trans=CU676593:139 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=139 |
| + | |distance_to_tss=9311 | ||
| + | |end=93591937 | ||
| + | |end_of_center_position=93591925 | ||
|entrez_id=5950 | |entrez_id=5950 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=MCOPCB10 | + | |gene_alias=MCOPCB10{{!}}RDCCAS |
|gene_description=retinol binding protein 4 | |gene_description=retinol binding protein 4 | ||
|gene_name=RBP4 | |gene_name=RBP4 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_006744 | |nearest_refseq=NM_006744 | ||
|nearest_unigene=Hs.50223 | |nearest_unigene=Hs.50223 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=93591911 | ||
| + | |start_of_center_position=93591924 | ||
| + | |strand=+ | ||
| + | |transcript_name=CU676593 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106288.1 | |tss_id=hg_106288.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93591924 |
|---|---|
| End of the center position in the TSS region: | 93591925 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU676593 |
|---|---|
| Distance: | 139 |
| Num_trans: | 1 |
| All_trans: | CU676593:139 |
TATA-Box annotation
| Distance to TSS: | 9311 |
|---|---|
| Nearest PromoterID: | NM_006744 |
| Entrez ID: | 5950 |
| Nearest Unigene: | Hs.50223 |
| Nearest Refseq: | NM_006744 |
| Nearest Ensembl: | ENSG00000138207 |
| Gene Name: | RBP4 |
| Gene Alias: | MCOPCB10|RDCCAS |
| Gene Description: | retinol binding protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
