Difference between revisions of "TSS:Hg 238423.1"
From referenceTSS
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| Line 8: | Line 8: | ||
|PN-II= | |PN-II= | ||
|PN2= | |PN2= | ||
| − | |all_trans= | + | |all_trans=HGNC:12015 |
| − | |chr= | + | |chr=chr2 |
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance= | + | |distance=34 |
| − | |distance_to_tss= | + | |distance_to_tss=-27 |
| − | |end= | + | |end=1484629 |
|end_of_center_position=1484629 | |end_of_center_position=1484629 | ||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=AAA | + | |gene_alias=AAA{{!}}ABETA{{!}}ABPP{{!}}AD1{{!}}APPI{{!}}CTFgamma{{!}}CVAP{{!}}PN-II{{!}}PN2{{!}}preA4 |
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
| − | |gene_id= | + | |gene_id=7173 |
| − | |gene_name= | + | |gene_name=thyroid peroxidase |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:12015 |
| − | |gene_symbol= | + | |gene_symbol=TPO |
| − | |gene_synonyms= | + | |gene_synonyms=TPX |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:12015 |
|nearest_ensembl=ENSG00000142192 | |nearest_ensembl=ENSG00000142192 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001204301 |
|nearest_refseq=NM_000484 | |nearest_refseq=NM_000484 | ||
|nearest_unigene=Hs.434980 | |nearest_unigene=Hs.434980 | ||
| − | |num_trans= | + | |num_trans=7173 |
|species=human | |species=human | ||
| − | |start= | + | |start=1484628 |
|start_of_center_position=1484628 | |start_of_center_position=1484628 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=ENST00000446278.5 AF533530 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_238423.1 | |tss_id=hg_238423.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=H7C1F5 |
}} | }} | ||
Latest revision as of 13:21, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1484628 |
|---|---|
| End of the center position in the TSS region: | 1484629 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000446278.5 AF533530 |
|---|---|
| Distance: | 34 |
| Num_trans: | 7173 |
| All_trans: | HGNC:12015 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001204301 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | thyroid peroxidase |
| Gene Alias: | AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
