Difference between revisions of "TSS:Hg 106336.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-40 |entrez_id=1562 |gc_percent=0.507463 |gene_alias=CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 |gene_description=cytochrome P450...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CYP2C= | ||
| + | |CYP2C17= | ||
| + | |P450-6B/29C= | ||
| + | |P450IIC17= | ||
| + | |all_trans=HGNC:2620 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss=- | + | |distance=161 |
| + | |distance_to_tss=-275 | ||
| + | |end=94683460 | ||
| + | |end_of_center_position=94683454 | ||
|entrez_id=1562 | |entrez_id=1562 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=CPCI | + | |gene_alias=CPCI{{!}}CYP2C{{!}}CYP2C17{{!}}P450-6B/29C{{!}}P450IIC17 |
|gene_description=cytochrome P450 family 2 subfamily C member 18 | |gene_description=cytochrome P450 family 2 subfamily C member 18 | ||
| − | |gene_name=CYP2C18 | + | |gene_id=1562 |
| + | |gene_name=cytochrome P450 family 2 subfamily C member 18 | ||
| + | |gene_source=HGNC:2620 | ||
| + | |gene_symbol=CYP2C18 | ||
| + | |gene_synonyms=CPCI CYP2C P450IIC17 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2620 | ||
|nearest_ensembl=ENSG00000108242 | |nearest_ensembl=ENSG00000108242 | ||
|nearest_promoter_id=NM_001128925 | |nearest_promoter_id=NM_001128925 | ||
|nearest_refseq=NM_000772 | |nearest_refseq=NM_000772 | ||
|nearest_unigene=Hs.511872 | |nearest_unigene=Hs.511872 | ||
| + | |num_trans=1562 | ||
| + | |species=human | ||
| + | |start=94683447 | ||
| + | |start_of_center_position=94683453 | ||
| + | |strand=+ | ||
| + | |transcript_name=M61856 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106336.1 | |tss_id=hg_106336.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:50, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94683453 |
|---|---|
| End of the center position in the TSS region: | 94683454 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | M61856 |
|---|---|
| Distance: | 161 |
| Num_trans: | 1562 |
| All_trans: | HGNC:2620 |
TATA-Box annotation
| Distance to TSS: | -275 |
|---|---|
| Nearest PromoterID: | NM_001128925 |
| Entrez ID: | 1562 |
| Nearest Unigene: | Hs.511872 |
| Nearest Refseq: | NM_000772 |
| Nearest Ensembl: | ENSG00000108242 |
| Gene Name: | cytochrome P450 family 2 subfamily C member 18 |
| Gene Alias: | CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 |
| Gene Description: | cytochrome P450 family 2 subfamily C member 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
