Difference between revisions of "TSS:Hg 100271.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
|P15= | |P15= | ||
|TP15= | |TP15= | ||
| − | |all_trans= | + | |all_trans=HGNC:1788 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=-23 | |distance=-23 | ||
| − | |distance_to_tss= | + | |distance_to_tss=59 |
|end=22009249 | |end=22009249 | ||
|end_of_center_position=22009246 | |end_of_center_position=22009246 | ||
|entrez_id=1030 | |entrez_id=1030 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=CDK4I | + | |gene_alias=CDK4I{{!}}INK4B{{!}}MTS2{{!}}P15{{!}}TP15{{!}}p15INK4b |
|gene_description=cyclin dependent kinase inhibitor 2B | |gene_description=cyclin dependent kinase inhibitor 2B | ||
|gene_id=1030 | |gene_id=1030 | ||
| − | |gene_name=cyclin | + | |gene_name=cyclin dependent kinase inhibitor 2B |
|gene_source=HGNC:1788 | |gene_source=HGNC:1788 | ||
|gene_symbol=CDKN2B | |gene_symbol=CDKN2B | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004936 | |nearest_refseq=NM_004936 | ||
|nearest_unigene=Hs.72901 | |nearest_unigene=Hs.72901 | ||
| − | |num_trans= | + | |num_trans=1030 |
|p15INK4b= | |p15INK4b= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=22009245 | |start_of_center_position=22009245 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000380142. | + | |transcript_name=ENST00000380142.5 AF004819 U17075 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100271.1 | |tss_id=hg_100271.1 | ||
Latest revision as of 17:39, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22009245 |
|---|---|
| End of the center position in the TSS region: | 22009246 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380142.5 AF004819 U17075 |
|---|---|
| Distance: | -23 |
| Num_trans: | 1030 |
| All_trans: | HGNC:1788 |
TATA-Box annotation
| Distance to TSS: | 59 |
|---|---|
| Nearest PromoterID: | NM_004936 |
| Entrez ID: | 1030 |
| Nearest Unigene: | Hs.72901 |
| Nearest Refseq: | NM_004936 |
| Nearest Ensembl: | ENSG00000147883 |
| Gene Name: | cyclin dependent kinase inhibitor 2B |
| Gene Alias: | CDK4I|INK4B|MTS2|P15|TP15|p15INK4b |
| Gene Description: | cyclin dependent kinase inhibitor 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
