Difference between revisions of "TSS:Hg 13970.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|UNR= | |UNR= | ||
| − | |all_trans= | + | |all_trans=HGNC:29905 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 10: | Line 10: | ||
|entrez_id=7812 | |entrez_id=7812 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| − | |gene_alias=D1S155E | + | |gene_alias=D1S155E{{!}}UNR |
|gene_description=cold shock domain containing E1 | |gene_description=cold shock domain containing E1 | ||
|gene_id=7812 | |gene_id=7812 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:29905 | |hgnc_mgi_id=HGNC:29905 | ||
|nearest_ensembl=ENSG00000009307 | |nearest_ensembl=ENSG00000009307 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242891 |
|nearest_refseq=NM_007158 | |nearest_refseq=NM_007158 | ||
|nearest_unigene=Hs.69855 | |nearest_unigene=Hs.69855 | ||
| − | |num_trans= | + | |num_trans=7812 |
|species=human | |species=human | ||
|start=114758614 | |start=114758614 | ||
|start_of_center_position=114758620 | |start_of_center_position=114758620 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000525878.5 | + | |transcript_name=ENST00000525878.5 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_13970.1 | |tss_id=hg_13970.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=E9PKN4 | |uniprot_id=E9PKN4 | ||
}} | }} | ||
Latest revision as of 07:57, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114758620 |
|---|---|
| End of the center position in the TSS region: | 114758621 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000525878.5 |
|---|---|
| Distance: | -49 |
| Num_trans: | 7812 |
| All_trans: | HGNC:29905 |
TATA-Box annotation
| Distance to TSS: | -571 |
|---|---|
| Nearest PromoterID: | NM_001242891 |
| Entrez ID: | 7812 |
| Nearest Unigene: | Hs.69855 |
| Nearest Refseq: | NM_007158 |
| Nearest Ensembl: | ENSG00000009307 |
| Gene Name: | cold shock domain containing E1 |
| Gene Alias: | D1S155E|UNR |
| Gene Description: | cold shock domain containing E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
