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Difference between revisions of "TSS:Hg 106379.1"

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(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=7 |entrez_id=9849 |gc_percent=0.537313 |gene_alias=ZNF518 |gene_description=zinc finger protein 518A |gene_name=ZNF518A |gene_ty...")
 
 
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{{TSSDetail
 
{{TSSDetail
 +
|all_trans=NM_001330738:0 NM_001330737:0 NM_001330736:0 NM_001330735:0 NM_001330733:0 LF345592:-137 MA581169:-137 LF345593:163 MA581170:163 ENST00000563195.1:-196 ENST00000539666.5:-212 ENST00000478086.5:-212 ENST00000624776.3:-212 NM_001278525:-212 NM_001330732:-212 AK095317:-212 BC030967:-212 NM_001330734:315 BC109046:-364 BC109045:-369 ENST00000484770.1:372
 +
|chr=chr10
 
|cpg_percent=0.07
 
|cpg_percent=0.07
 +
|distance=0
 
|distance_to_tss=7
 
|distance_to_tss=7
 +
|end=96130307
 +
|end_of_center_position=96130288
 
|entrez_id=9849
 
|entrez_id=9849
 
|gc_percent=0.537313
 
|gc_percent=0.537313
 
|gene_alias=ZNF518
 
|gene_alias=ZNF518
 
|gene_description=zinc finger protein 518A
 
|gene_description=zinc finger protein 518A
|gene_name=ZNF518A
+
|gene_id=9849
 +
|gene_name=zinc finger protein 518A
 +
|gene_source=HGNC:29009
 +
|gene_symbol=ZNF518A
 +
|gene_synonyms=KIAA0335
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:29009
 
|nearest_ensembl=ENSG00000177853
 
|nearest_ensembl=ENSG00000177853
|nearest_promoter_id=NM_001330736
+
|nearest_promoter_id=NM_001330735
 
|nearest_refseq=NM_014803
 
|nearest_refseq=NM_014803
 
|nearest_unigene=Hs.600823
 
|nearest_unigene=Hs.600823
 +
|num_trans=21
 +
|species=human
 +
|start=96130267
 +
|start_of_center_position=96130287
 +
|strand=+
 +
|transcript_name=NM_001330736.1 NM_001330737.1 NM_001330735.1 NM_001330733.1 NM_001330738.1
 +
|tss_classification=yes
 
|tss_id=hg_106379.1
 
|tss_id=hg_106379.1
 +
|tss_score=1
 +
|uniprot_id=Q6AHZ1
 
}}
 
}}

Latest revision as of 19:51, 19 July 2021

Basic information about the TSS


TSS ID:hg_106379.1
Species:human
Chr:chr10
TSS Classification:yes
Start:96130267
End:96130307
Strand:+
TSS Score:1
Start of the center position in the TSS region:96130287
End of the center position in the TSS region:96130288



Gene and protein annotation


Transcript_name:NM_001330736.1 NM_001330737.1 NM_001330735.1 NM_001330733.1 NM_001330738.1
Distance:0
GeneID:9849
HGNC/MGI_ID:HGNC:29009
UniProt_ID:Q6AHZ1
Gene_name:zinc finger protein 518A
Gene_symbol:ZNF518A
Gene_synonyms:KIAA0335
Gene_source:HGNC:29009



Transcript annotation


Transcript_name:NM_001330736.1 NM_001330737.1 NM_001330735.1 NM_001330733.1 NM_001330738.1
Distance:0
Num_trans:21
All_trans:NM_001330738:0 NM_001330737:0 NM_001330736:0 NM_001330735:0 NM_001330733:0 LF345592:-137 MA581169:-137 LF345593:163 MA581170:163 ENST00000563195.1:-196 ENST00000539666.5:-212 ENST00000478086.5:-212 ENST00000624776.3:-212 NM_001278525:-212 NM_001330732:-212 AK095317:-212 BC030967:-212 NM_001330734:315 BC109046:-364 BC109045:-369 ENST00000484770.1:372



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_001330735
Entrez ID:9849
Nearest Unigene:Hs.600823
Nearest Refseq:NM_014803
Nearest Ensembl:ENSG00000177853
Gene Name:zinc finger protein 518A
Gene Alias:ZNF518
Gene Description:zinc finger protein 518A
Gene Type:protein-coding
CpG%:0.07
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):