Difference between revisions of "TSS:Hg 100727.1"
From referenceTSS
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|GLYD= | |GLYD= | ||
|PH2= | |PH2= | ||
| − | |all_trans= | + | |all_trans=HGNC:52258 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=27 | |distance=27 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-38230 |
|end=37384472 | |end=37384472 | ||
|end_of_center_position=37384467 | |end_of_center_position=37384467 | ||
|entrez_id=9380 | |entrez_id=9380 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=GLXR | + | |gene_alias=GLXR{{!}}GLYD{{!}}PH2 |
|gene_description=glyoxylate and hydroxypyruvate reductase | |gene_description=glyoxylate and hydroxypyruvate reductase | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=long intergenic non-protein coding RNA 1627 | ||
| + | |gene_source=HGNC:52258 | ||
| + | |gene_symbol=LINC01627 | ||
| + | |gene_synonyms=RP11-397D12.4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:52258 | ||
|nearest_ensembl=ENSG00000137106 | |nearest_ensembl=ENSG00000137106 | ||
|nearest_promoter_id=NM_012203 | |nearest_promoter_id=NM_012203 | ||
|nearest_refseq=NM_012203 | |nearest_refseq=NM_012203 | ||
|nearest_unigene=Hs.155742 | |nearest_unigene=Hs.155742 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=37384460 | |start=37384460 | ||
|start_of_center_position=37384466 | |start_of_center_position=37384466 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000452923 | + | |transcript_name=ENST00000452923.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100727.1 | |tss_id=hg_100727.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:49, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37384466 |
|---|---|
| End of the center position in the TSS region: | 37384467 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000452923.1 |
|---|---|
| Distance: | 27 |
| Num_trans: | |
| All_trans: | HGNC:52258 |
TATA-Box annotation
| Distance to TSS: | -38230 |
|---|---|
| Nearest PromoterID: | NM_012203 |
| Entrez ID: | 9380 |
| Nearest Unigene: | Hs.155742 |
| Nearest Refseq: | NM_012203 |
| Nearest Ensembl: | ENSG00000137106 |
| Gene Name: | long intergenic non-protein coding RNA 1627 |
| Gene Alias: | GLXR|GLYD|PH2 |
| Gene Description: | glyoxylate and hydroxypyruvate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
