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Difference between revisions of "TSS:Hg 101062.1"

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Line 3: Line 3:
 
|C9orf65=
 
|C9orf65=
 
|KIAA0367=
 
|KIAA0367=
|all_trans=ENST00000376713.3:0 uc064tvb.1:0 ENST00000376718.7:-2 ENST00000492157.5:-2 NM_001308048:-2 NM_001308047:-2 NR_131751:-2 NM_015225:-2 uc010mpk.4:-2 uc004akn.4:-2 BC019095:-2 ENST00000443509.6:33 ENST00000428286.5:33 uc064tur.1:33 uc064tus.1:33 FJ808772:33 FJ808773:33 KJ903913:110 AB535152:111
+
|all_trans=HGNC:25209
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 12: Line 12:
 
|entrez_id=158471
 
|entrez_id=158471
 
|gc_percent=0.746269
 
|gc_percent=0.746269
|gene_alias=BMCC1
+
|gene_alias=BMCC1{{!}}BNIPXL{{!}}C9orf65{{!}}KIAA0367
|gene_description=prune homolog 2
+
|gene_description=prune homolog 2 with BCH domain
 
|gene_id=158471
 
|gene_id=158471
|gene_name=prune homolog 2 (Drosophila)
+
|gene_name=prune homolog 2 with BCH domain
 
|gene_source=HGNC:25209
 
|gene_source=HGNC:25209
 
|gene_symbol=PRUNE2
 
|gene_symbol=PRUNE2
Line 22: Line 22:
 
|hgnc_mgi_id=HGNC:25209
 
|hgnc_mgi_id=HGNC:25209
 
|nearest_ensembl=ENSG00000106772
 
|nearest_ensembl=ENSG00000106772
|nearest_promoter_id=NM_015225
+
|nearest_promoter_id=NR_131751
 
|nearest_refseq=NM_015225
 
|nearest_refseq=NM_015225
 
|nearest_unigene=Hs.262857
 
|nearest_unigene=Hs.262857
|num_trans=19
+
|num_trans=158471
 
|species=human
 
|species=human
 
|start=76906073
 
|start=76906073
 
|start_of_center_position=76906079
 
|start_of_center_position=76906079
 
|strand=-
 
|strand=-
|transcript_name=ENST00000376713.3 uc064tvb.1
+
|transcript_name=ENST00000376713.3
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_101062.1
 
|tss_id=hg_101062.1

Latest revision as of 17:57, 19 July 2021

Basic information about the TSS


TSS ID:hg_101062.1
Species:human
Chr:chr9
TSS Classification:yes
Start:76906073
End:76906085
Strand:-
TSS Score:1
Start of the center position in the TSS region:76906079
End of the center position in the TSS region:76906080



Gene and protein annotation


Transcript_name:ENST00000376713.3
Distance:0
GeneID:158471
HGNC/MGI_ID:HGNC:25209
UniProt_ID:X6R9J3
Gene_name:prune homolog 2 with BCH domain
Gene_symbol:PRUNE2
Gene_synonyms:A214N16.3 BMCC1 BNIPXL bA214N16.3
Gene_source:HGNC:25209



Transcript annotation


Transcript_name:ENST00000376713.3
Distance:0
Num_trans:158471
All_trans:HGNC:25209



TATA-Box annotation


Distance to TSS:8
Nearest PromoterID:NR_131751
Entrez ID:158471
Nearest Unigene:Hs.262857
Nearest Refseq:NM_015225
Nearest Ensembl:ENSG00000106772
Gene Name:prune homolog 2 with BCH domain
Gene Alias:BMCC1|BNIPXL|C9orf65|KIAA0367
Gene Description:prune homolog 2 with BCH domain
Gene Type:protein-coding
CpG%:0.125
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):