Difference between revisions of "TSS:Hg 106425.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-113035 |entrez_id=100505540 |gc_percent=0.363184 |gene_alias=- |gene_description=SLIT1 antisense RNA 1 |gene_name=SLIT1-AS1 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=NA | ||
|distance_to_tss=-113035 | |distance_to_tss=-113035 | ||
| + | |end=96989723 | ||
| + | |end_of_center_position=96989721 | ||
|entrez_id=100505540 | |entrez_id=100505540 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_038330 | |nearest_refseq=NR_038330 | ||
|nearest_unigene=Hs.568878 | |nearest_unigene=Hs.568878 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=96989718 | ||
| + | |start_of_center_position=96989720 | ||
| + | |strand=+ | ||
| + | |tata_box=-6(TTTTTAATAGAG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106425.1 | |tss_id=hg_106425.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:37, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 96989720 |
|---|---|
| End of the center position in the TSS region: | 96989721 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -113035 |
|---|---|
| Nearest PromoterID: | NR_038330 |
| Entrez ID: | 100505540 |
| Nearest Unigene: | Hs.568878 |
| Nearest Refseq: | NR_038330 |
| Nearest Ensembl: | ENSG00000234855 |
| Gene Name: | SLIT1-AS1 |
| Gene Alias: | - |
| Gene Description: | SLIT1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -6(TTTTTAATAGAG,+,0.00) |
