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Difference between revisions of "TSS:Hg 14814.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=CR936667:263 AK074067:276 BC143765:-294 NM_001010846:-295 NR_135169:-295 BC117210:-295 ENST00000304760.2:-358 uc001ffb.4:-358
+
|all_trans=HGNC:27004
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.125
 
|cpg_percent=0.125
 
|distance=263
 
|distance=263
|distance_to_tss=300
+
|distance_to_tss=-469
 
|end=154501755
 
|end=154501755
 
|end_of_center_position=154501750
 
|end_of_center_position=154501750
|entrez_id=126669
+
|entrez_id=126668
 
|gc_percent=0.746269
 
|gc_percent=0.746269
 
|gene_alias=-
 
|gene_alias=-
|gene_description=Src homology 2 domain containing E
+
|gene_description=tudor domain containing 10
 
|gene_id=126669
 
|gene_id=126669
 
|gene_name=Src homology 2 domain containing E
 
|gene_name=Src homology 2 domain containing E
Line 18: Line 18:
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:27004
 
|hgnc_mgi_id=HGNC:27004
|nearest_ensembl=ENSG00000169291
+
|nearest_ensembl=ENSG00000163239
|nearest_promoter_id=NR_135169
+
|nearest_promoter_id=NM_182499
|nearest_refseq=NM_001010846
+
|nearest_refseq=NM_182499
|nearest_unigene=Hs.591481
+
|nearest_unigene=Hs.387671
|num_trans=8
+
|num_trans=126669
 
|species=human
 
|species=human
 
|start=154501744
 
|start=154501744

Latest revision as of 11:00, 20 July 2021

Basic information about the TSS


TSS ID:hg_14814.1
Species:human
Chr:chr1
TSS Classification:yes
Start:154501744
End:154501755
Strand:-
TSS Score:1
Start of the center position in the TSS region:154501749
End of the center position in the TSS region:154501750



Gene and protein annotation


Transcript_name:CR936667
Distance:263
GeneID:126669
HGNC/MGI_ID:HGNC:27004
UniProt_ID:
Gene_name:Src homology 2 domain containing E
Gene_symbol:SHE
Gene_synonyms:
Gene_source:HGNC:27004



Transcript annotation


Transcript_name:CR936667
Distance:263
Num_trans:126669
All_trans:HGNC:27004



TATA-Box annotation


Distance to TSS:-469
Nearest PromoterID:NM_182499
Entrez ID:126668
Nearest Unigene:Hs.387671
Nearest Refseq:NM_182499
Nearest Ensembl:ENSG00000163239
Gene Name:Src homology 2 domain containing E
Gene Alias:-
Gene Description:tudor domain containing 10
Gene Type:protein-coding
CpG%:0.125
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):