Difference between revisions of "TSS:Hg 233158.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|MPS1= | |MPS1= | ||
|S27= | |S27= | ||
| + | |all_trans=HGNC:25316 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-146 |
| − | |distance_to_tss= | + | |distance_to_tss=879 |
| − | |end= | + | |end=154502365 |
|end_of_center_position=154502365 | |end_of_center_position=154502365 | ||
|entrez_id=6232 | |entrez_id=6232 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=MPS-1 | + | |gene_alias=DBA17{{!}}MPS-1{{!}}MPS1{{!}}S27 |
|gene_description=ribosomal protein S27 | |gene_description=ribosomal protein S27 | ||
| − | |gene_name= | + | |gene_id=126668 |
| + | |gene_name=tudor domain containing 10 | ||
| + | |gene_source=HGNC:25316 | ||
| + | |gene_symbol=TDRD10 | ||
| + | |gene_synonyms=DKFZp434M202 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25316 | ||
|nearest_ensembl=ENSG00000177954 | |nearest_ensembl=ENSG00000177954 | ||
|nearest_promoter_id=NM_001030 | |nearest_promoter_id=NM_001030 | ||
|nearest_refseq=NM_001030 | |nearest_refseq=NM_001030 | ||
|nearest_unigene=Hs.546291 | |nearest_unigene=Hs.546291 | ||
| − | |num_trans= | + | |num_trans=126668 |
|species=human | |species=human | ||
| − | |start= | + | |start=154502364 |
|start_of_center_position=154502364 | |start_of_center_position=154502364 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=ENST00000368482.8 BC044864 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233158.1 | |tss_id=hg_233158.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5VZ19 | ||
}} | }} | ||
Latest revision as of 11:26, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 154502364 |
|---|---|
| End of the center position in the TSS region: | 154502365 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000368482.8 BC044864 |
|---|---|
| Distance: | -146 |
| Num_trans: | 126668 |
| All_trans: | HGNC:25316 |
TATA-Box annotation
| Distance to TSS: | 879 |
|---|---|
| Nearest PromoterID: | NM_001030 |
| Entrez ID: | 6232 |
| Nearest Unigene: | Hs.546291 |
| Nearest Refseq: | NM_001030 |
| Nearest Ensembl: | ENSG00000177954 |
| Gene Name: | tudor domain containing 10 |
| Gene Alias: | DBA17|MPS-1|MPS1|S27 |
| Gene Description: | ribosomal protein S27 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
