Difference between revisions of "TSS:Hg 10647.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30313 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=174 | ||
|distance_to_tss=73 | |distance_to_tss=73 | ||
| + | |end=19210478 | ||
| + | |end_of_center_position=19210459 | ||
|entrez_id=101927895 | |entrez_id=101927895 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=EMC1 antisense RNA 1 |
| − | |gene_name= | + | |gene_id=23352 |
| + | |gene_name=ubiquitin protein ligase E3 component n-recognin 4 | ||
| + | |gene_source=HGNC:30313 | ||
| + | |gene_symbol=UBR4 | ||
| + | |gene_synonyms=KIAA0462 KIAA1307 RBAF600 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:30313 | ||
|nearest_ensembl=ENSG00000230424 | |nearest_ensembl=ENSG00000230424 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_135114 |
|nearest_refseq=NR_135114 | |nearest_refseq=NR_135114 | ||
|nearest_unigene=Hs.660534 | |nearest_unigene=Hs.660534 | ||
| + | |num_trans=23352 | ||
| + | |species=human | ||
| + | |start=19210439 | ||
| + | |start_of_center_position=19210458 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375254.8 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10647.1 | |tss_id=hg_10647.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T4S7 | ||
}} | }} | ||
Latest revision as of 19:54, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19210458 |
|---|---|
| End of the center position in the TSS region: | 19210459 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375254.8 |
|---|---|
| Distance: | 174 |
| Num_trans: | 23352 |
| All_trans: | HGNC:30313 |
TATA-Box annotation
| Distance to TSS: | 73 |
|---|---|
| Nearest PromoterID: | NR_135114 |
| Entrez ID: | 101927895 |
| Nearest Unigene: | Hs.660534 |
| Nearest Refseq: | NR_135114 |
| Nearest Ensembl: | ENSG00000230424 |
| Gene Name: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Alias: | - |
| Gene Description: | EMC1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
