Difference between revisions of "TSS:Hg 10651.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=30 |entrez_id=23065 |gc_percent=0.701493 |gene_alias=CAVIPMR|KIAA0090 |gene_description=ER membrane protein complex subunit 1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KIAA0090= | ||
| + | |all_trans=HGNC:28957 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-5 | ||
| + | |end=19251547 | ||
| + | |end_of_center_position=19251530 | ||
|entrez_id=23065 | |entrez_id=23065 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=CAVIPMR | + | |gene_alias=CAVIPMR{{!}}KIAA0090 |
|gene_description=ER membrane protein complex subunit 1 | |gene_description=ER membrane protein complex subunit 1 | ||
| − | |gene_name=EMC1 | + | |gene_id=23065 |
| + | |gene_name=ER membrane protein complex subunit 1 | ||
| + | |gene_source=HGNC:28957 | ||
| + | |gene_symbol=EMC1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28957 | ||
|nearest_ensembl=ENSG00000127463 | |nearest_ensembl=ENSG00000127463 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_015047 |
|nearest_refseq=NM_015047 | |nearest_refseq=NM_015047 | ||
|nearest_unigene=Hs.439200 | |nearest_unigene=Hs.439200 | ||
| + | |num_trans=23065 | ||
| + | |species=human | ||
| + | |start=19251511 | ||
| + | |start_of_center_position=19251529 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000477853.6 ENST00000375208.7 ENST00000475079.1 ENST00000488681.1 BX648708 AK075563 BX648627 AK291618 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10651.1 | |tss_id=hg_10651.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5TG59 Q8N766 | ||
}} | }} | ||
Latest revision as of 19:54, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 19251529 |
|---|---|
| End of the center position in the TSS region: | 19251530 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000477853.6 ENST00000375208.7 ENST00000475079.1 ENST00000488681.1 BX648708 AK075563 BX648627 AK291618 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23065 |
| All_trans: | HGNC:28957 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_015047 |
| Entrez ID: | 23065 |
| Nearest Unigene: | Hs.439200 |
| Nearest Refseq: | NM_015047 |
| Nearest Ensembl: | ENSG00000127463 |
| Gene Name: | ER membrane protein complex subunit 1 |
| Gene Alias: | CAVIPMR|KIAA0090 |
| Gene Description: | ER membrane protein complex subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
