Difference between revisions of "TSS:Hg 102155.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=2546 |
|end=114385441 | |end=114385441 | ||
|end_of_center_position=114385436 | |end_of_center_position=114385436 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=114385435 | |start_of_center_position=114385435 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-85(CCCTTTAAAAAG,+,0.00),-85(CCCTTTAAAAAG,-,0.00),-83(CTTTAAAAAGTC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114385435 |
|---|---|
| End of the center position in the TSS region: | 114385436 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2546 |
|---|---|
| Nearest PromoterID: | NM_001317950 |
| Entrez ID: | 80709 |
| Nearest Unigene: | Hs.494895 |
| Nearest Refseq: | NM_030767 |
| Nearest Ensembl: | ENSG00000106948 |
| Gene Name: | AKNA |
| Gene Alias: | - |
| Gene Description: | AT-hook transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -85(CCCTTTAAAAAG,+,0.00),-85(CCCTTTAAAAAG,-,0.00),-83(CTTTAAAAAGTC,+,0.00) |
