Difference between revisions of "TSS:Hg 6366.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:8632 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=51 |
|end=164559778 | |end=164559778 | ||
|end_of_center_position=164559773 | |end_of_center_position=164559773 | ||
|entrez_id=5087 | |entrez_id=5087 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias= | + | |gene_alias=CAKUHED |
|gene_description=PBX homeobox 1 | |gene_description=PBX homeobox 1 | ||
|gene_id=5087 | |gene_id=5087 | ||
| − | |gene_name= | + | |gene_name=PBX homeobox 1 |
|gene_source=HGNC:8632 | |gene_source=HGNC:8632 | ||
|gene_symbol=PBX1 | |gene_symbol=PBX1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:8632 | |hgnc_mgi_id=HGNC:8632 | ||
|nearest_ensembl=ENSG00000185630 | |nearest_ensembl=ENSG00000185630 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001353130 |
|nearest_refseq=NM_002585 | |nearest_refseq=NM_002585 | ||
|nearest_unigene=Hs.557097 | |nearest_unigene=Hs.557097 | ||
| − | |num_trans= | + | |num_trans=5087 |
|species=human | |species=human | ||
|start=164559767 | |start=164559767 | ||
Latest revision as of 05:35, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 164559772 |
|---|---|
| End of the center position in the TSS region: | 164559773 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC101578 BC143435 BC143451 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5087 |
| All_trans: | HGNC:8632 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_001353130 |
| Entrez ID: | 5087 |
| Nearest Unigene: | Hs.557097 |
| Nearest Refseq: | NM_002585 |
| Nearest Ensembl: | ENSG00000185630 |
| Gene Name: | PBX homeobox 1 |
| Gene Alias: | CAKUHED |
| Gene Description: | PBX homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
