Difference between revisions of "TSS:Hg 102332.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-2386 | |distance_to_tss=-2386 | ||
|end=120931566 | |end=120931566 | ||
| Line 9: | Line 9: | ||
|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=EBI6 | + | |gene_alias=EBI6{{!}}MGC:10353 |
|gene_description=TNF receptor associated factor 1 | |gene_description=TNF receptor associated factor 1 | ||
|gene_name=TRAF1 | |gene_name=TRAF1 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=120931559 | |start_of_center_position=120931559 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-36(GCTTTTATAGGC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120931559 |
|---|---|
| End of the center position in the TSS region: | 120931560 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2386 |
|---|---|
| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TRAF1 |
| Gene Alias: | EBI6|MGC:10353 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GCTTTTATAGGC,+,0.00) |
