Difference between revisions of "TSS:Hg 233703.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PRO1385= | |PRO1385= | ||
| − | |all_trans= | + | |all_trans=HGNC:16951 |
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=4 |
| − | |distance_to_tss= | + | |distance_to_tss=30523 |
| − | |end= | + | |end=185317279 |
|end_of_center_position=185317278 | |end_of_center_position=185317278 | ||
|entrez_id=79608 | |entrez_id=79608 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
| − | |gene_alias=AYST720 | + | |gene_alias=AYST720{{!}}PRO1385 |
|gene_description=RIC3 acetylcholine receptor chaperone | |gene_description=RIC3 acetylcholine receptor chaperone | ||
| − | |gene_id= | + | |gene_id=10625 |
| − | |gene_name= | + | |gene_name=influenza virus NS1A binding protein |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:16951 |
| − | |gene_symbol= | + | |gene_symbol=IVNS1ABP |
| − | |gene_synonyms= | + | |gene_synonyms=ARA3 HSPC068 KIAA0850 KLHL39 ND1 NS-1 NS1-BP |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:16951 |
|nearest_ensembl=ENSG00000166405 | |nearest_ensembl=ENSG00000166405 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001346693 |
|nearest_refseq=NM_024557 | |nearest_refseq=NM_024557 | ||
|nearest_unigene=Hs.231850 | |nearest_unigene=Hs.231850 | ||
| − | |num_trans= | + | |num_trans=10625 |
|species=human | |species=human | ||
| − | |start= | + | |start=185317276 |
|start_of_center_position=185317277 | |start_of_center_position=185317277 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000459929.5 AK023123 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233703.1 | |tss_id=hg_233703.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:38, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185317277 |
|---|---|
| End of the center position in the TSS region: | 185317278 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000459929.5 AK023123 |
|---|---|
| Distance: | 4 |
| Num_trans: | 10625 |
| All_trans: | HGNC:16951 |
TATA-Box annotation
| Distance to TSS: | 30523 |
|---|---|
| Nearest PromoterID: | NM_001346693 |
| Entrez ID: | 79608 |
| Nearest Unigene: | Hs.231850 |
| Nearest Refseq: | NM_024557 |
| Nearest Ensembl: | ENSG00000166405 |
| Gene Name: | influenza virus NS1A binding protein |
| Gene Alias: | AYST720|PRO1385 |
| Gene Description: | RIC3 acetylcholine receptor chaperone |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
