Difference between revisions of "TSS:Hg 233784.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 5: | Line 5: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-342 |
| − | |end= | + | |end=200487914 |
|end_of_center_position=200487906 | |end_of_center_position=200487906 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=CAPB | + | |gene_alias=CAPB{{!}}CAPPB{{!}}CAPZ |
| − | |gene_description=capping actin protein of muscle Z-line beta | + | |gene_description=capping actin protein of muscle Z-line subunit beta |
|gene_id=832 | |gene_id=832 | ||
| − | |gene_name= | + | |gene_name=CAPZB |
|gene_source=HGNC:1491 | |gene_source=HGNC:1491 | ||
|gene_symbol=CAPZB | |gene_symbol=CAPZB | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=200487897 |
|start_of_center_position=200487905 | |start_of_center_position=200487905 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_233784.1 | |tss_id=hg_233784.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B1AK88 | |uniprot_id=B1AK88 | ||
}} | }} | ||
Latest revision as of 09:08, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 200487905 |
|---|---|
| End of the center position in the TSS region: | 200487906 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000433834.5:-27 uc010ocz.3:-27 NM_001282162:-70 AK301442:-70 |
TATA-Box annotation
| Distance to TSS: | -342 |
|---|---|
| Nearest PromoterID: | NM_001282162 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | CAPZB |
| Gene Alias: | CAPB|CAPPB|CAPZ |
| Gene Description: | capping actin protein of muscle Z-line subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
