Difference between revisions of "TSS:Hg 100476.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SUGT1P= | ||
| + | |all_trans=NR_003667:0 ENST00000379514.2:389 | ||
| + | |bA255A11.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=30 | |distance_to_tss=30 | ||
| + | |end=33511173 | ||
| + | |end_of_center_position=33511137 | ||
|entrez_id=441394 | |entrez_id=441394 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=SGT1P | + | |gene_alias=SGT1P{{!}}SUGT1P{{!}}bA255A11.1 |
| − | |gene_description= | + | |gene_description=SUGT1 pseudogene 1 |
| − | |gene_name=SUGT1P1 | + | |gene_id=441394 |
| + | |gene_name=SUGT1 pseudogene 1 | ||
| + | |gene_source=HGNC:19384 | ||
| + | |gene_symbol=SUGT1P1 | ||
| + | |gene_synonyms=MGC15151 SGT1P bA255A11.1 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:19384 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_003667 | |nearest_promoter_id=NR_003667 | ||
|nearest_refseq=NR_003667 | |nearest_refseq=NR_003667 | ||
|nearest_unigene=Hs.521441 | |nearest_unigene=Hs.521441 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=33511099 | ||
| + | |start_of_center_position=33511136 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_003667.3 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100476.1 | |tss_id=hg_100476.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:44, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 33511136 |
|---|---|
| End of the center position in the TSS region: | 33511137 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_003667.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NR_003667:0 ENST00000379514.2:389 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NR_003667 |
| Entrez ID: | 441394 |
| Nearest Unigene: | Hs.521441 |
| Nearest Refseq: | NR_003667 |
| Nearest Ensembl: | |
| Gene Name: | SUGT1 pseudogene 1 |
| Gene Alias: | SGT1P|SUGT1P|bA255A11.1 |
| Gene Description: | SUGT1 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.11 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
