Difference between revisions of "TSS:Mm 100703.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2144114 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=166 |
|distance_to_tss=-549 | |distance_to_tss=-549 | ||
|end=3648099 | |end=3648099 | ||
| Line 11: | Line 11: | ||
|gene_alias=AI316828 | |gene_alias=AI316828 | ||
|gene_description=taurine upregulated gene 1 | |gene_description=taurine upregulated gene 1 | ||
| − | |gene_name=Tug1 | + | |gene_id= |
| + | |gene_name=taurine upregulated gene 1 | ||
| + | |gene_source=MGI:2144114 | ||
| + | |gene_symbol=Tug1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=MGI:2144114 | ||
|nearest_ensembl=ENSMUSG00000056579 | |nearest_ensembl=ENSMUSG00000056579 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_110490 |
|nearest_refseq=NR_002321 | |nearest_refseq=NR_002321 | ||
|nearest_unigene=Mm.390314 | |nearest_unigene=Mm.390314 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=3648071 | |start=3648071 | ||
|start_of_center_position=3648085 | |start_of_center_position=3648085 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000226724.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100703.1 | |tss_id=mm_100703.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3648085 |
|---|---|
| End of the center position in the TSS region: | 3648086 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000226724.1 |
|---|---|
| Distance: | 166 |
| Num_trans: | |
| All_trans: | MGI:2144114 |
TATA-Box annotation
| Distance to TSS: | -549 |
|---|---|
| Nearest PromoterID: | NR_110490 |
| Entrez ID: | 544752 |
| Nearest Unigene: | Mm.390314 |
| Nearest Refseq: | NR_002321 |
| Nearest Ensembl: | ENSMUSG00000056579 |
| Gene Name: | taurine upregulated gene 1 |
| Gene Alias: | AI316828 |
| Gene Description: | taurine upregulated gene 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
