Difference between revisions of "TSS:Hg 23492.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:14303 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-36 | |distance=-36 | ||
| − | |distance_to_tss= | + | |distance_to_tss=62903 |
|end=167250279 | |end=167250279 | ||
|end_of_center_position=167250276 | |end_of_center_position=167250276 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152381 | |nearest_refseq=NM_152381 | ||
|nearest_unigene=Hs.73680 | |nearest_unigene=Hs.73680 | ||
| − | |num_trans= | + | |num_trans=129446 |
|species=human | |species=human | ||
|start=167250271 | |start=167250271 | ||
|start_of_center_position=167250275 | |start_of_center_position=167250275 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-61(CCTTAAATATAG,+,0.00) |
|transcript_name=BC107799 | |transcript_name=BC107799 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 12:04, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 167250275 |
|---|---|
| End of the center position in the TSS region: | 167250276 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC107799 |
|---|---|
| Distance: | -36 |
| Num_trans: | 129446 |
| All_trans: | HGNC:14303 |
TATA-Box annotation
| Distance to TSS: | 62903 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | CMYA3 |
| Gene Description: | xin actin binding repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -61(CCTTAAATATAG,+,0.00) |
