Difference between revisions of "TSS:Hg 14817.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:27004 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=425 |
| − | |distance_to_tss= | + | |distance_to_tss=-439 |
|end=154502866 | |end=154502866 | ||
| − | |entrez_id= | + | |end_of_center_position=154502852 |
| + | |entrez_id=126669 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=Src homology 2 domain containing E |
| − | |gene_name= | + | |gene_id=126669 |
| + | |gene_name=Src homology 2 domain containing E | ||
| + | |gene_source=HGNC:27004 | ||
| + | |gene_symbol=SHE | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:27004 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000169291 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_001010846 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_001010846 |
| − | |num_trans= | + | |nearest_unigene=Hs.591481 |
| + | |num_trans=126669 | ||
|species=human | |species=human | ||
|start=154502836 | |start=154502836 | ||
| + | |start_of_center_position=154502851 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000304760.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14817.1 | |tss_id=hg_14817.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5VZ18 | ||
}} | }} | ||
Latest revision as of 11:01, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 154502851 |
|---|---|
| End of the center position in the TSS region: | 154502852 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000304760.3 |
|---|---|
| Distance: | 425 |
| Num_trans: | 126669 |
| All_trans: | HGNC:27004 |
TATA-Box annotation
| Distance to TSS: | -439 |
|---|---|
| Nearest PromoterID: | NM_001010846 |
| Entrez ID: | 126669 |
| Nearest Unigene: | Hs.591481 |
| Nearest Refseq: | NM_001010846 |
| Nearest Ensembl: | ENSG00000169291 |
| Gene Name: | Src homology 2 domain containing E |
| Gene Alias: | - |
| Gene Description: | Src homology 2 domain containing E |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
