Difference between revisions of "TSS:Hg 103687.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=5463 |
|end=6208395 | |end=6208395 | ||
|end_of_center_position=6208395 | |end_of_center_position=6208395 | ||
|entrez_id=5209 | |entrez_id=5209 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=IPFK2 | + | |gene_alias=IPFK2{{!}}PFK2{{!}}iPFK-2 |
| − | |gene_description= | + | |gene_description=6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
|gene_name=PFKFB3 | |gene_name=PFKFB3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|iPFK-2= | |iPFK-2= | ||
|nearest_ensembl=ENSG00000170525 | |nearest_ensembl=ENSG00000170525 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363545 |
|nearest_refseq=NM_004566 | |nearest_refseq=NM_004566 | ||
|nearest_unigene=Hs.195471 | |nearest_unigene=Hs.195471 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=6208394 | |start_of_center_position=6208394 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-1(GCCTCTTAAAAA,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6208394 |
|---|---|
| End of the center position in the TSS region: | 6208395 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 5463 |
|---|---|
| Nearest PromoterID: | NM_001363545 |
| Entrez ID: | 5209 |
| Nearest Unigene: | Hs.195471 |
| Nearest Refseq: | NM_004566 |
| Nearest Ensembl: | ENSG00000170525 |
| Gene Name: | PFKFB3 |
| Gene Alias: | IPFK2|PFK2|iPFK-2 |
| Gene Description: | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -1(GCCTCTTAAAAA,-,0.00) |
