Difference between revisions of "TSS:Hg 108309.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23514 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
|distance=-4 | |distance=-4 | ||
| − | |distance_to_tss= | + | |distance_to_tss=58 |
|end=13528970 | |end=13528970 | ||
|end_of_center_position=13528957 | |end_of_center_position=13528957 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23514 | |hgnc_mgi_id=HGNC:23514 | ||
|nearest_ensembl=ENSG00000165626 | |nearest_ensembl=ENSG00000165626 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369863 |
|nearest_refseq=NM_152751 | |nearest_refseq=NM_152751 | ||
|nearest_unigene=Hs.498740 | |nearest_unigene=Hs.498740 | ||
| − | |num_trans= | + | |num_trans=222389 |
|species=human | |species=human | ||
|start=13528942 | |start=13528942 | ||
|start_of_center_position=13528956 | |start_of_center_position=13528956 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000466271 | + | |transcript_name=ENST00000466271.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_108309.1 | |tss_id=hg_108309.1 | ||
Latest revision as of 20:33, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 13528956 |
|---|---|
| End of the center position in the TSS region: | 13528957 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000466271.1 |
|---|---|
| Distance: | -4 |
| Num_trans: | 222389 |
| All_trans: | HGNC:23514 |
TATA-Box annotation
| Distance to TSS: | 58 |
|---|---|
| Nearest PromoterID: | NM_001369863 |
| Entrez ID: | 222389 |
| Nearest Unigene: | Hs.498740 |
| Nearest Refseq: | NM_152751 |
| Nearest Ensembl: | ENSG00000165626 |
| Gene Name: | BEN domain containing 7 |
| Gene Alias: | C10orf30 |
| Gene Description: | BEN domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
