Difference between revisions of "TSS:Hg 232192.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=21922 | |distance_to_tss=21922 | ||
| − | |end= | + | |end=15078995 |
|end_of_center_position=15078988 | |end_of_center_position=15078988 | ||
|entrez_id=222389 | |entrez_id=222389 | ||
| Line 12: | Line 12: | ||
|gene_description=BEN domain containing 7 | |gene_description=BEN domain containing 7 | ||
|gene_id=222389 | |gene_id=222389 | ||
| − | |gene_name= | + | |gene_name=BEND7 |
|gene_source=HGNC:23514 | |gene_source=HGNC:23514 | ||
|gene_symbol=BEND7 | |gene_symbol=BEND7 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23514 | |hgnc_mgi_id=HGNC:23514 | ||
|nearest_ensembl=ENSG00000165626 | |nearest_ensembl=ENSG00000165626 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152751 |
|nearest_refseq=NM_152751 | |nearest_refseq=NM_152751 | ||
|nearest_unigene=Hs.498740 | |nearest_unigene=Hs.498740 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=15078980 |
|start_of_center_position=15078987 | |start_of_center_position=15078987 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232192.1 | |tss_id=hg_232192.1 | ||
Latest revision as of 08:31, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 15078987 |
|---|---|
| End of the center position in the TSS region: | 15078988 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000440282.5:-19 uc057ruc.1:-19 AL832195:-19 ENST00000469555.1:78 uc057ruf.1:78 |
TATA-Box annotation
| Distance to TSS: | 21922 |
|---|---|
| Nearest PromoterID: | NM_152751 |
| Entrez ID: | 222389 |
| Nearest Unigene: | Hs.498740 |
| Nearest Refseq: | NM_152751 |
| Nearest Ensembl: | ENSG00000165626 |
| Gene Name: | BEND7 |
| Gene Alias: | C10orf30 |
| Gene Description: | BEN domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
