Difference between revisions of "TSS:Hg 104330.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF346219:17 MA581796:17 LF346218:-332 MA581795:-332 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=17 |
| − | |distance_to_tss=- | + | |distance_to_tss=-11874 |
|end=24437543 | |end=24437543 | ||
|end_of_center_position=24437541 | |end_of_center_position=24437541 | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=SKT | + | |gene_alias=ETL4{{!}}SKT |
|gene_description=KIAA1217 | |gene_description=KIAA1217 | ||
|gene_name=KIAA1217 | |gene_name=KIAA1217 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_019590 | |nearest_refseq=NM_019590 | ||
|nearest_unigene=Hs.445885 | |nearest_unigene=Hs.445885 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=24437537 | |start=24437537 | ||
|start_of_center_position=24437540 | |start_of_center_position=24437540 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF346219 MA581796 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_104330.1 | |tss_id=hg_104330.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:03, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24437540 |
|---|---|
| End of the center position in the TSS region: | 24437541 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346219 MA581796 |
|---|---|
| Distance: | 17 |
| Num_trans: | 4 |
| All_trans: | LF346219:17 MA581796:17 LF346218:-332 MA581795:-332 |
TATA-Box annotation
| Distance to TSS: | -11874 |
|---|---|
| Nearest PromoterID: | NM_001282769 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | ETL4|SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
