Difference between revisions of "TSS:Hg 104437.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TPT= | |TPT= | ||
|TPT 1= | |TPT 1= | ||
| + | |all_trans=LF346249:-122 MA581826:-122 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-122 |
| − | |distance_to_tss= | + | |distance_to_tss=40236 |
|end=26737958 | |end=26737958 | ||
|end_of_center_position=26737938 | |end_of_center_position=26737938 | ||
|entrez_id=23590 | |entrez_id=23590 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=COQ1 | + | |gene_alias=COQ1{{!}}COQ10D2{{!}}COQ1A{{!}}DPS{{!}}SPS{{!}}TPRT{{!}}TPT{{!}}TPT 1{{!}}hDPS1 |
|gene_description=decaprenyl diphosphate synthase subunit 1 | |gene_description=decaprenyl diphosphate synthase subunit 1 | ||
|gene_name=PDSS1 | |gene_name=PDSS1 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_014317 | |nearest_refseq=NM_014317 | ||
|nearest_unigene=Hs.558468 | |nearest_unigene=Hs.558468 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=26737916 | |start=26737916 | ||
|start_of_center_position=26737937 | |start_of_center_position=26737937 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-36(GAGTTGAAAAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=LF346249 MA581826 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104437.1 | |tss_id=hg_104437.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26737937 |
|---|---|
| End of the center position in the TSS region: | 26737938 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346249 MA581826 |
|---|---|
| Distance: | -122 |
| Num_trans: | 2 |
| All_trans: | LF346249:-122 MA581826:-122 |
TATA-Box annotation
| Distance to TSS: | 40236 |
|---|---|
| Nearest PromoterID: | NM_014317 |
| Entrez ID: | 23590 |
| Nearest Unigene: | Hs.558468 |
| Nearest Refseq: | NM_014317 |
| Nearest Ensembl: | ENSG00000148459 |
| Gene Name: | PDSS1 |
| Gene Alias: | COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 |
| Gene Description: | decaprenyl diphosphate synthase subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GAGTTGAAAAGG,-,0.00) |
