Difference between revisions of "TSS:Hg 232300.1"
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:28572 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=3 |
|distance_to_tss=13053 | |distance_to_tss=13053 | ||
| − | |end= | + | |end=48176215 |
|end_of_center_position=48176215 | |end_of_center_position=48176215 | ||
| − | |entrez_id= | + | |entrez_id=100133093 |
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias= | + | |gene_alias=FAM25A{{!}}FAM25B{{!}}FAM25C{{!}}bA301J7.4 |
| − | |gene_description=family with sequence similarity 25 member | + | |gene_description=family with sequence similarity 25 member G |
| − | |gene_name= | + | |gene_id=143162 |
| + | |gene_name=FERM and PDZ domain containing 2 | ||
| + | |gene_source=HGNC:28572 | ||
| + | |gene_symbol=FRMPD2 | ||
| + | |gene_synonyms=MGC35285 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:28572 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000189090 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_001137549 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_001137549 |
| − | |num_trans= | + | |nearest_unigene=Hs.723078 |
| + | |num_trans=143162 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=48176214 |
|start_of_center_position=48176214 | |start_of_center_position=48176214 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000474573.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232300.1 | |tss_id=hg_232300.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:07, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 48176214 |
|---|---|
| End of the center position in the TSS region: | 48176215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000474573.5 |
|---|---|
| Distance: | 3 |
| Num_trans: | 143162 |
| All_trans: | HGNC:28572 |
TATA-Box annotation
| Distance to TSS: | 13053 |
|---|---|
| Nearest PromoterID: | NM_001137549 |
| Entrez ID: | 100133093 |
| Nearest Unigene: | Hs.723078 |
| Nearest Refseq: | NM_001137549 |
| Nearest Ensembl: | ENSG00000189090 |
| Gene Name: | FERM and PDZ domain containing 2 |
| Gene Alias: | FAM25A|FAM25B|FAM25C|bA301J7.4 |
| Gene Description: | family with sequence similarity 25 member G |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
