Difference between revisions of "TSS:Hg 105007.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CYSRD= | |CYSRD= | ||
| − | |all_trans= | + | |all_trans=HGNC:19351 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance= | + | |distance=-112 |
| − | |distance_to_tss= | + | |distance_to_tss=117 |
|end=58512994 | |end=58512994 | ||
|end_of_center_position=58512989 | |end_of_center_position=58512989 | ||
|entrez_id=80114 | |entrez_id=80114 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=BICC | + | |gene_alias=BICC{{!}}CYSRD |
|gene_description=BicC family RNA binding protein 1 | |gene_description=BicC family RNA binding protein 1 | ||
|gene_id=80114 | |gene_id=80114 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001080512 | |nearest_refseq=NM_001080512 | ||
|nearest_unigene=Hs.100261 | |nearest_unigene=Hs.100261 | ||
| − | |num_trans= | + | |num_trans=80114 |
|species=human | |species=human | ||
|start=58512983 | |start=58512983 | ||
|start_of_center_position=58512988 | |start_of_center_position=58512988 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000373886.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105007.1 | |tss_id=hg_105007.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9H694 |
}} | }} | ||
Latest revision as of 19:22, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 58512988 |
|---|---|
| End of the center position in the TSS region: | 58512989 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000373886.8 |
|---|---|
| Distance: | -112 |
| Num_trans: | 80114 |
| All_trans: | HGNC:19351 |
TATA-Box annotation
| Distance to TSS: | 117 |
|---|---|
| Nearest PromoterID: | NM_001080512 |
| Entrez ID: | 80114 |
| Nearest Unigene: | Hs.100261 |
| Nearest Refseq: | NM_001080512 |
| Nearest Ensembl: | ENSG00000122870 |
| Gene Name: | BicC family RNA binding protein 1 |
| Gene Alias: | BICC|CYSRD |
| Gene Description: | BicC family RNA binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
