Difference between revisions of "TSS:Hg 106018.1"
From referenceTSS
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|GDH1= | |GDH1= | ||
|GLUD= | |GLUD= | ||
| − | |all_trans= | + | |all_trans=HGNC:28773 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=-308 | |distance=-308 | ||
| − | |distance_to_tss= | + | |distance_to_tss=354 |
|end=87094509 | |end=87094509 | ||
|end_of_center_position=87094489 | |end_of_center_position=87094489 | ||
|entrez_id=2746 | |entrez_id=2746 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=GDH | + | |gene_alias=GDH{{!}}GDH1{{!}}GLUD |
|gene_description=glutamate dehydrogenase 1 | |gene_description=glutamate dehydrogenase 1 | ||
|gene_id=54537 | |gene_id=54537 | ||
| − | |gene_name= | + | |gene_name=shieldin complex subunit 2 |
|gene_source=HGNC:28773 | |gene_source=HGNC:28773 | ||
| − | |gene_symbol= | + | |gene_symbol=SHLD2 |
| − | |gene_synonyms=FAM35A1 MGC5560 bA163M19.1 | + | |gene_synonyms=FAM35A1 MGC5560 RINN2 bA163M19.1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:28773 | |hgnc_mgi_id=HGNC:28773 | ||
|nearest_ensembl=ENSG00000148672 | |nearest_ensembl=ENSG00000148672 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318906 |
|nearest_refseq=NM_005271 | |nearest_refseq=NM_005271 | ||
|nearest_unigene=Hs.500409 | |nearest_unigene=Hs.500409 | ||
| − | |num_trans= | + | |num_trans=54537 |
|species=human | |species=human | ||
|start=87094468 | |start=87094468 | ||
|start_of_center_position=87094488 | |start_of_center_position=87094488 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000437629.6 | + | |transcript_name=ENST00000437629.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106018.1 | |tss_id=hg_106018.1 | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 87094488 |
|---|---|
| End of the center position in the TSS region: | 87094489 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000437629.6 |
|---|---|
| Distance: | -308 |
| Num_trans: | 54537 |
| All_trans: | HGNC:28773 |
TATA-Box annotation
| Distance to TSS: | 354 |
|---|---|
| Nearest PromoterID: | NM_001318906 |
| Entrez ID: | 2746 |
| Nearest Unigene: | Hs.500409 |
| Nearest Refseq: | NM_005271 |
| Nearest Ensembl: | ENSG00000148672 |
| Gene Name: | shieldin complex subunit 2 |
| Gene Alias: | GDH|GDH1|GLUD |
| Gene Description: | glutamate dehydrogenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
