Difference between revisions of "TSS:Hg 220130.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28773 |
|bA163M19.1= | |bA163M19.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=36 | |distance=36 | ||
| − | |distance_to_tss= | + | |distance_to_tss=62875 |
|end=87158081 | |end=87158081 | ||
|end_of_center_position=87158081 | |end_of_center_position=87158081 | ||
|entrez_id=54537 | |entrez_id=54537 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| − | |gene_alias=FAM35A1 | + | |gene_alias=FAM35A{{!}}FAM35A1{{!}}RINN2{{!}}bA163M19.1 |
| − | |gene_description= | + | |gene_description=shieldin complex subunit 2 |
|gene_id=54537 | |gene_id=54537 | ||
| − | |gene_name= | + | |gene_name=shieldin complex subunit 2 |
|gene_source=HGNC:28773 | |gene_source=HGNC:28773 | ||
| − | |gene_symbol= | + | |gene_symbol=SHLD2 |
| − | |gene_synonyms=FAM35A1 MGC5560 bA163M19.1 | + | |gene_synonyms=FAM35A1 MGC5560 RINN2 bA163M19.1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:28773 | |hgnc_mgi_id=HGNC:28773 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_019054 | |nearest_refseq=NM_019054 | ||
|nearest_unigene=Hs.500419 | |nearest_unigene=Hs.500419 | ||
| − | |num_trans= | + | |num_trans=54537 |
|species=human | |species=human | ||
|start=87158080 | |start=87158080 | ||
Latest revision as of 07:25, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 87158080 |
|---|---|
| End of the center position in the TSS region: | 87158081 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF131775 |
|---|---|
| Distance: | 36 |
| Num_trans: | 54537 |
| All_trans: | HGNC:28773 |
TATA-Box annotation
| Distance to TSS: | 62875 |
|---|---|
| Nearest PromoterID: | NM_019054 |
| Entrez ID: | 54537 |
| Nearest Unigene: | Hs.500419 |
| Nearest Refseq: | NM_019054 |
| Nearest Ensembl: | ENSG00000122376 |
| Gene Name: | shieldin complex subunit 2 |
| Gene Alias: | FAM35A|FAM35A1|RINN2|bA163M19.1 |
| Gene Description: | shieldin complex subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
