Difference between revisions of "TSS:Hg 232459.1"
From referenceTSS
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|ACTSA= | |ACTSA= | ||
|MYMY5= | |MYMY5= | ||
| + | |all_trans=HGNC:26736 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=8869 |
| − | |end= | + | |end=91409287 |
|end_of_center_position=91409281 | |end_of_center_position=91409281 | ||
|entrez_id=59 | |entrez_id=59 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias= | + | |gene_alias=ACTSA |
| − | |gene_description= | + | |gene_description=actin alpha 2, smooth muscle |
| − | |gene_name= | + | |gene_id=143279 |
| + | |gene_name=HECT domain E3 ubiquitin protein ligase 2 | ||
| + | |gene_source=HGNC:26736 | ||
| + | |gene_symbol=HECTD2 | ||
| + | |gene_synonyms=FLJ37306 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26736 | ||
|nearest_ensembl=ENSG00000107796 | |nearest_ensembl=ENSG00000107796 | ||
|nearest_promoter_id=NM_001613 | |nearest_promoter_id=NM_001613 | ||
|nearest_refseq=NM_001613 | |nearest_refseq=NM_001613 | ||
|nearest_unigene=Hs.500483 | |nearest_unigene=Hs.500483 | ||
| − | |num_trans= | + | |num_trans=143279 |
|species=human | |species=human | ||
| − | |start= | + | |start=91409273 |
|start_of_center_position=91409280 | |start_of_center_position=91409280 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000631422.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232459.1 | |tss_id=hg_232459.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A0J9YVV1 | ||
}} | }} | ||
Latest revision as of 11:11, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 91409280 |
|---|---|
| End of the center position in the TSS region: | 91409281 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000631422.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 143279 |
| All_trans: | HGNC:26736 |
TATA-Box annotation
| Distance to TSS: | 8869 |
|---|---|
| Nearest PromoterID: | NM_001613 |
| Entrez ID: | 59 |
| Nearest Unigene: | Hs.500483 |
| Nearest Refseq: | NM_001613 |
| Nearest Ensembl: | ENSG00000107796 |
| Gene Name: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Alias: | ACTSA |
| Gene Description: | actin alpha 2, smooth muscle |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
