Difference between revisions of "TSS:Hg 106327.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|PASG= | |PASG= | ||
|SMARCA6= | |SMARCA6= | ||
| − | |all_trans= | + | |all_trans=HGNC:4861 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-11 | |distance=-11 | ||
| − | |distance_to_tss= | + | |distance_to_tss=70 |
|end=94545863 | |end=94545863 | ||
|end_of_center_position=94545859 | |end_of_center_position=94545859 | ||
|entrez_id=3070 | |entrez_id=3070 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=ICF4 | + | |gene_alias=ICF4{{!}}LSH{{!}}Nbla10143{{!}}PASG{{!}}SMARCA6 |
| − | |gene_description= | + | |gene_description=helicase, lymphoid specific |
|gene_id=3070 | |gene_id=3070 | ||
| − | |gene_name= | + | |gene_name=helicase, lymphoid specific |
|gene_source=HGNC:4861 | |gene_source=HGNC:4861 | ||
|gene_symbol=HELLS | |gene_symbol=HELLS | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:4861 | |hgnc_mgi_id=HGNC:4861 | ||
|nearest_ensembl=ENSG00000119969 | |nearest_ensembl=ENSG00000119969 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001289075 |
|nearest_refseq=NM_018063 | |nearest_refseq=NM_018063 | ||
|nearest_unigene=Hs.463677 | |nearest_unigene=Hs.463677 | ||
| − | |num_trans= | + | |num_trans=3070 |
|species=human | |species=human | ||
|start=94545853 | |start=94545853 | ||
Latest revision as of 19:50, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 94545858 |
|---|---|
| End of the center position in the TSS region: | 94545859 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC111789 |
|---|---|
| Distance: | -11 |
| Num_trans: | 3070 |
| All_trans: | HGNC:4861 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_001289075 |
| Entrez ID: | 3070 |
| Nearest Unigene: | Hs.463677 |
| Nearest Refseq: | NM_018063 |
| Nearest Ensembl: | ENSG00000119969 |
| Gene Name: | helicase, lymphoid specific |
| Gene Alias: | ICF4|LSH|Nbla10143|PASG|SMARCA6 |
| Gene Description: | helicase, lymphoid specific |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
