Difference between revisions of "TSS:Hg 106430.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000445808.3 | + | |all_trans=ENST00000445808.3:-306 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-306 | |distance=-306 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-145 |
|end=97334879 | |end=97334879 | ||
|end_of_center_position=97334875 | |end_of_center_position=97334875 | ||
|entrez_id=23401 | |entrez_id=23401 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=- | + | |gene_alias=FRAT-2 |
| − | |gene_description= | + | |gene_description=FRAT regulator of WNT signaling pathway 2 |
|gene_name=FRAT2 | |gene_name=FRAT2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 17: | Line 17: | ||
|nearest_refseq=NM_012083 | |nearest_refseq=NM_012083 | ||
|nearest_unigene=Hs.140720 | |nearest_unigene=Hs.140720 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=97334869 | |start=97334869 | ||
|start_of_center_position=97334874 | |start_of_center_position=97334874 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000445808.3 | + | |transcript_name=ENST00000445808.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106430.1 | |tss_id=hg_106430.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:37, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 97334874 |
|---|---|
| End of the center position in the TSS region: | 97334875 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000445808.3 |
|---|---|
| Distance: | -306 |
| Num_trans: | 1 |
| All_trans: | ENST00000445808.3:-306 |
TATA-Box annotation
| Distance to TSS: | -145 |
|---|---|
| Nearest PromoterID: | NM_012083 |
| Entrez ID: | 23401 |
| Nearest Unigene: | Hs.140720 |
| Nearest Refseq: | NM_012083 |
| Nearest Ensembl: | ENSG00000181274 |
| Gene Name: | FRAT2 |
| Gene Alias: | FRAT-2 |
| Gene Description: | FRAT regulator of WNT signaling pathway 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
