Difference between revisions of "TSS:Hg 232060.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:25460 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=4 |
| − | |distance_to_tss=- | + | |distance_to_tss=-459 |
| − | |end= | + | |end=101062586 |
|end_of_center_position=101062586 | |end_of_center_position=101062586 | ||
|entrez_id=84445 | |entrez_id=84445 | ||
| Line 11: | Line 11: | ||
|gene_alias=LAPSER1 | |gene_alias=LAPSER1 | ||
|gene_description=leucine zipper tumor suppressor 2 | |gene_description=leucine zipper tumor suppressor 2 | ||
| − | |gene_id= | + | |gene_id=81621 |
| − | |gene_name= | + | |gene_name=Kazal type serine peptidase inhibitor domain 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:25460 |
| − | |gene_symbol= | + | |gene_symbol=KAZALD1 |
| − | |gene_synonyms= | + | |gene_synonyms=FKSG28 FKSG40 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:25460 |
|nearest_ensembl=ENSG00000107816 | |nearest_ensembl=ENSG00000107816 | ||
|nearest_promoter_id=NM_001318100 | |nearest_promoter_id=NM_001318100 | ||
|nearest_refseq=NM_032429 | |nearest_refseq=NM_032429 | ||
|nearest_unigene=Hs.523221 | |nearest_unigene=Hs.523221 | ||
| − | |num_trans= | + | |num_trans=81621 |
|species=human | |species=human | ||
| − | |start= | + | |start=101062585 |
|start_of_center_position=101062585 | |start_of_center_position=101062585 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=DQ896001 DQ892757 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232060.1 | |tss_id=hg_232060.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 11:02, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101062585 |
|---|---|
| End of the center position in the TSS region: | 101062586 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | DQ896001 DQ892757 |
|---|---|
| Distance: | 4 |
| Num_trans: | 81621 |
| All_trans: | HGNC:25460 |
TATA-Box annotation
| Distance to TSS: | -459 |
|---|---|
| Nearest PromoterID: | NM_001318100 |
| Entrez ID: | 84445 |
| Nearest Unigene: | Hs.523221 |
| Nearest Refseq: | NM_032429 |
| Nearest Ensembl: | ENSG00000107816 |
| Gene Name: | Kazal type serine peptidase inhibitor domain 1 |
| Gene Alias: | LAPSER1 |
| Gene Description: | leucine zipper tumor suppressor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
