Difference between revisions of "TSS:Hg 107315.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:4544 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=847 |
|end=119208424 | |end=119208424 | ||
|end_of_center_position=119208418 | |end_of_center_position=119208418 | ||
|entrez_id=2869 | |entrez_id=2869 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=GPRK5 | + | |gene_alias=FP2025{{!}}GPRK5 |
|gene_description=G protein-coupled receptor kinase 5 | |gene_description=G protein-coupled receptor kinase 5 | ||
|gene_id=2869 | |gene_id=2869 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005308 | |nearest_refseq=NM_005308 | ||
|nearest_unigene=Hs.524625 | |nearest_unigene=Hs.524625 | ||
| − | |num_trans= | + | |num_trans=2869 |
|species=human | |species=human | ||
|start=119208411 | |start=119208411 | ||
|start_of_center_position=119208417 | |start_of_center_position=119208417 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=68(GCCTTTTAAAGG,-,0.00),69(CCTTTTAAAGGC,+,0.00),70(CTTTTAAAGGCA,+,0.00) |
|transcript_name=AK298261 | |transcript_name=AK298261 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 20:12, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 119208417 |
|---|---|
| End of the center position in the TSS region: | 119208418 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK298261 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2869 |
| All_trans: | HGNC:4544 |
TATA-Box annotation
| Distance to TSS: | 847 |
|---|---|
| Nearest PromoterID: | NM_005308 |
| Entrez ID: | 2869 |
| Nearest Unigene: | Hs.524625 |
| Nearest Refseq: | NM_005308 |
| Nearest Ensembl: | ENSG00000198873 |
| Gene Name: | G protein-coupled receptor kinase 5 |
| Gene Alias: | FP2025|GPRK5 |
| Gene Description: | G protein-coupled receptor kinase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 68(GCCTTTTAAAGG,-,0.00),69(CCTTTTAAAGGC,+,0.00),70(CTTTTAAAGGCA,+,0.00) |
