Difference between revisions of "TSS:Mm 99407.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000140040.1:-258 BC019642:-258 | + | |all_trans=LF230853:-138 MA466430:-138 LF230854:231 MA466431:231 ENSMUST00000140040.1:-258 BC019642:-258 LF230852:-323 MA466429:-323 LF230851:-414 MA466428:-414 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance=- | + | |distance=-138 |
| − | |distance_to_tss=- | + | |distance_to_tss=-6525 |
|end=102262230 | |end=102262230 | ||
|end_of_center_position=102262226 | |end_of_center_position=102262226 | ||
| Line 12: | Line 12: | ||
|gene_description=ankyrin repeat and SOCS box-containing 16 | |gene_description=ankyrin repeat and SOCS box-containing 16 | ||
|gene_id=217216 | |gene_id=217216 | ||
| − | |gene_name= | + | |gene_name=Asb16 |
|gene_source=MGI:2387601 | |gene_source=MGI:2387601 | ||
|gene_symbol=BC030867 | |gene_symbol=BC030867 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_148953 | |nearest_refseq=NM_148953 | ||
|nearest_unigene=Mm.216432 | |nearest_unigene=Mm.216432 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=102262221 | |start=102262221 | ||
|start_of_center_position=102262225 | |start_of_center_position=102262225 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF230853 MA466430 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99407.1 | |tss_id=mm_99407.1 | ||
Latest revision as of 03:50, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102262225 |
|---|---|
| End of the center position in the TSS region: | 102262226 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF230853 MA466430 |
|---|---|
| Distance: | -138 |
| Num_trans: | 10 |
| All_trans: | LF230853:-138 MA466430:-138 LF230854:231 MA466431:231 ENSMUST00000140040.1:-258 BC019642:-258 LF230852:-323 MA466429:-323 LF230851:-414 MA466428:-414 |
TATA-Box annotation
| Distance to TSS: | -6525 |
|---|---|
| Nearest PromoterID: | NM_148953 |
| Entrez ID: | 217217 |
| Nearest Unigene: | Mm.216432 |
| Nearest Refseq: | NM_148953 |
| Nearest Ensembl: | ENSMUSG00000034768 |
| Gene Name: | Asb16 |
| Gene Alias: | - |
| Gene Description: | ankyrin repeat and SOCS box-containing 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
