Difference between revisions of "TSS:Mm 50370.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BB145400= | |BB145400= | ||
| − | |all_trans=BC038043:15 BC096680:-35 AK041336:-47 NM_174960 | + | |all_trans=LF283580:0 MA519157:0 BC038043:15 BC096680:-35 AK041336:-47 NM_174960:-59 ENSMUST00000054050.4:-65 LF195478:-66 MA431055:-66 LF283581:159 MA519158:159 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=66 | |distance_to_tss=66 | ||
|end=48676209 | |end=48676209 | ||
| Line 10: | Line 10: | ||
|entrez_id=317758 | |entrez_id=317758 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=A630002K24 | + | |gene_alias=A630002K24{{!}}BB145400{{!}}IAN-7 |
| − | |gene_description= | + | |gene_description=GTPase, IMAP family member 9 |
|gene_id=317758 | |gene_id=317758 | ||
| − | |gene_name= | + | |gene_name=Gimap9 |
|gene_source=MGI:3511744 | |gene_source=MGI:3511744 | ||
|gene_symbol=Gimap9 | |gene_symbol=Gimap9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_174960 | |nearest_refseq=NM_174960 | ||
|nearest_unigene=Mm.116971 | |nearest_unigene=Mm.116971 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=48676193 | |start=48676193 | ||
|start_of_center_position=48676201 | |start_of_center_position=48676201 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF283580 MA519157 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_50370.1 | |tss_id=mm_50370.1 | ||
Latest revision as of 09:15, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48676201 |
|---|---|
| End of the center position in the TSS region: | 48676202 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF283580 MA519157 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | LF283580:0 MA519157:0 BC038043:15 BC096680:-35 AK041336:-47 NM_174960:-59 ENSMUST00000054050.4:-65 LF195478:-66 MA431055:-66 LF283581:159 MA519158:159 |
TATA-Box annotation
| Distance to TSS: | 66 |
|---|---|
| Nearest PromoterID: | NM_174960 |
| Entrez ID: | 317758 |
| Nearest Unigene: | Mm.116971 |
| Nearest Refseq: | NM_174960 |
| Nearest Ensembl: | ENSMUSG00000051124 |
| Gene Name: | Gimap9 |
| Gene Alias: | A630002K24|BB145400|IAN-7 |
| Gene Description: | GTPase, IMAP family member 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
