Difference between revisions of "TSS:Hg 112139.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|POF12= | |POF12= | ||
|SPGF15= | |SPGF15= | ||
| − | |all_trans= | + | |all_trans=HGNC:28852 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=9 | |distance=9 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-15 |
|end=133565603 | |end=133565603 | ||
|end_of_center_position=133565598 | |end_of_center_position=133565598 | ||
|entrez_id=93426 | |entrez_id=93426 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=C10orf94 | + | |gene_alias=C10orf94{{!}}CT76{{!}}POF12{{!}}SPGF15 |
|gene_description=synaptonemal complex central element protein 1 | |gene_description=synaptonemal complex central element protein 1 | ||
|gene_id=93426 | |gene_id=93426 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_130784 | |nearest_refseq=NM_130784 | ||
|nearest_unigene=Hs.553795 | |nearest_unigene=Hs.553795 | ||
| − | |num_trans= | + | |num_trans=93426 |
|species=human | |species=human | ||
|start=133565592 | |start=133565592 | ||
|start_of_center_position=133565597 | |start_of_center_position=133565597 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC034821 | + | |transcript_name=BC034821 GQ901041 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112139.1 | |tss_id=hg_112139.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A384NQ41 |
}} | }} | ||
Latest revision as of 21:56, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133565597 |
|---|---|
| End of the center position in the TSS region: | 133565598 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC034821 GQ901041 |
|---|---|
| Distance: | 9 |
| Num_trans: | 93426 |
| All_trans: | HGNC:28852 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_001143764 |
| Entrez ID: | 93426 |
| Nearest Unigene: | Hs.553795 |
| Nearest Refseq: | NM_130784 |
| Nearest Ensembl: | ENSG00000171772 |
| Gene Name: | synaptonemal complex central element protein 1 |
| Gene Alias: | C10orf94|CT76|POF12|SPGF15 |
| Gene Description: | synaptonemal complex central element protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
