Difference between revisions of "TSS:Hg 233662.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10377 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=33 |
| − | |end= | + | |end=810002 |
|end_of_center_position=809996 | |end_of_center_position=809996 | ||
|entrez_id=8495 | |entrez_id=8495 | ||
| Line 11: | Line 11: | ||
|gene_alias=Cclp1 | |gene_alias=Cclp1 | ||
|gene_description=PPFIA binding protein 2 | |gene_description=PPFIA binding protein 2 | ||
| − | |gene_id= | + | |gene_id=6181 |
| − | |gene_name= | + | |gene_name=ribosomal protein lateral stalk subunit P2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:10377 |
| − | |gene_symbol= | + | |gene_symbol=RPLP2 |
| − | |gene_synonyms= | + | |gene_synonyms=LP2 MGC71408 P2 RPP2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:10377 |
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351857 |
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=6181 |
|species=human | |species=human | ||
| − | |start= | + | |start=809988 |
|start_of_center_position=809995 | |start_of_center_position=809995 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC007573 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233662.1 | |tss_id=hg_233662.1 | ||
Latest revision as of 11:37, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 809995 |
|---|---|
| End of the center position in the TSS region: | 809996 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC007573 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6181 |
| All_trans: | HGNC:10377 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_001351857 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
