Difference between revisions of "TSS:Hg 233667.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000525722.1:-246 ENST00000527517.1:453 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=55 |
|distance_to_tss=9761 | |distance_to_tss=9761 | ||
| − | |end= | + | |end=811626 |
|end_of_center_position=811622 | |end_of_center_position=811622 | ||
|entrez_id=4975 | |entrez_id=4975 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=olfactory marker protein | |gene_description=olfactory marker protein | ||
| − | |gene_name= | + | |gene_id=6181 |
| + | |gene_name=ribosomal protein lateral stalk subunit P2 | ||
| + | |gene_source=HGNC:10377 | ||
| + | |gene_symbol=RPLP2 | ||
| + | |gene_synonyms=LP2 MGC71408 P2 RPP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10377 | ||
|nearest_ensembl=ENSG00000254550 | |nearest_ensembl=ENSG00000254550 | ||
|nearest_promoter_id=NM_006189 | |nearest_promoter_id=NM_006189 | ||
|nearest_refseq=NM_006189 | |nearest_refseq=NM_006189 | ||
|nearest_unigene=Hs.673853 | |nearest_unigene=Hs.673853 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
| − | |start= | + | |start=811617 |
|start_of_center_position=811621 | |start_of_center_position=811621 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=NR_002585.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233667.1 | |tss_id=hg_233667.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:37, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 811621 |
|---|---|
| End of the center position in the TSS region: | 811622 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_002585.1 |
|---|---|
| Distance: | 55 |
| Num_trans: | 2 |
| All_trans: | ENST00000525722.1:-246 ENST00000527517.1:453 |
TATA-Box annotation
| Distance to TSS: | 9761 |
|---|---|
| Nearest PromoterID: | NM_006189 |
| Entrez ID: | 4975 |
| Nearest Unigene: | Hs.673853 |
| Nearest Refseq: | NM_006189 |
| Nearest Ensembl: | ENSG00000254550 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | - |
| Gene Description: | olfactory marker protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
