Difference between revisions of "TSS:Hg 118084.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC010185:150 BC106079:209 BC106078:-259 ENST00000442037.5 | + | |all_trans=LF370702:-45 MA606279:-45 BC010185:150 LF370700:197 MA606277:197 BC106079:209 BC106078:-259 LF370699:274 MA606276:274 LF370698:333 MA606275:333 ENST00000442037.5:-462 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=-45 |
|distance_to_tss=1105 | |distance_to_tss=1105 | ||
|end=1995729 | |end=1995729 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=MIR675 |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=1995722 | |start=1995722 | ||
|start_of_center_position=1995725 | |start_of_center_position=1995725 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF370702 MA606279 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_118084.1 | |tss_id=hg_118084.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 23:44, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1995725 |
|---|---|
| End of the center position in the TSS region: | 1995726 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF370702 MA606279 |
|---|---|
| Distance: | -45 |
| Num_trans: | 12 |
| All_trans: | LF370702:-45 MA606279:-45 BC010185:150 LF370700:197 MA606277:197 BC106079:209 BC106078:-259 LF370699:274 MA606276:274 LF370698:333 MA606275:333 ENST00000442037.5:-462 |
TATA-Box annotation
| Distance to TSS: | 1105 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | MIR675 |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
