Difference between revisions of "TSS:Hg 118098.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000447298. | + | |all_trans=LF370706:-10 MA606283:-10 ENST00000447298.2:-59 ENST00000431095.7:114 ENST00000436715.5:-163 LF370707:-184 MA606284:-184 BC009853:-185 AK123560:-193 ENST00000442037.5:203 LC106311:-240 BC013067:-297 ENST00000417089.6:-332 LF370708:-367 MA606285:-367 MB407720:-379 AB372813:-379 LF160018:-379 LP726824:-379 LP819094:-379 LP939036:-379 LQ072819:-379 LQ441148:-379 LX280753:-379 LY405562:-379 LZ234371:-379 MA260801:-379 MA646320:-379 MA734204:-379 MS833933:-379 MS834818:-379 MA803373:-379 MB406830:-379 BC106078:406 LF160208:-414 LP727120:-414 LP819390:-414 LP939332:-414 LQ072820:-414 LQ441143:-414 LQ673013:-414 LY405561:-414 LY496320:-414 LY496766:-414 LY497013:-414 LY497420:-414 LY497638:-414 LY498022:-414 LZ234253:-414 LZ238499:-414 LZ239038:-414 MA260800:-414 MA405867:-414 MA646321:-414 MA734205:-414 MS833934:-414 MS884200:-414 MS884607:-414 MS902101:-414 MS994328:-414 MS994774:-414 MS996704:-414 MS997088:-414 MA803374:-414 MA805853:-414 MA806405:-414 MA822458:-414 LY616263:-414 LY616802:-414 LG052084:-423 LY496531:-423 LY497206:-423 LY497818:-423 LZ238758:-423 MS884393:-423 MS994539:-423 MS996884:-423 MA806128:-423 MA822797:-423 LY616522:-423 MB407223:-423 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance=- | + | |distance=-10 |
|distance_to_tss=430 | |distance_to_tss=430 | ||
|end=1996408 | |end=1996408 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=MIR675 |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=81 |
|species=human | |species=human | ||
|start=1996393 | |start=1996393 | ||
|start_of_center_position=1996400 | |start_of_center_position=1996400 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF370706 MA606283 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118098.1 | |tss_id=hg_118098.1 | ||
Latest revision as of 23:07, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1996400 |
|---|---|
| End of the center position in the TSS region: | 1996401 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF370706 MA606283 |
|---|---|
| Distance: | -10 |
| Num_trans: | 81 |
| All_trans: | LF370706:-10 MA606283:-10 ENST00000447298.2:-59 ENST00000431095.7:114 ENST00000436715.5:-163 LF370707:-184 MA606284:-184 BC009853:-185 AK123560:-193 ENST00000442037.5:203 LC106311:-240 BC013067:-297 ENST00000417089.6:-332 LF370708:-367 MA606285:-367 MB407720:-379 AB372813:-379 LF160018:-379 LP726824:-379 LP819094:-379 LP939036:-379 LQ072819:-379 LQ441148:-379 LX280753:-379 LY405562:-379 LZ234371:-379 MA260801:-379 MA646320:-379 MA734204:-379 MS833933:-379 MS834818:-379 MA803373:-379 MB406830:-379 BC106078:406 LF160208:-414 LP727120:-414 LP819390:-414 LP939332:-414 LQ072820:-414 LQ441143:-414 LQ673013:-414 LY405561:-414 LY496320:-414 LY496766:-414 LY497013:-414 LY497420:-414 LY497638:-414 LY498022:-414 LZ234253:-414 LZ238499:-414 LZ239038:-414 MA260800:-414 MA405867:-414 MA646321:-414 MA734205:-414 MS833934:-414 MS884200:-414 MS884607:-414 MS902101:-414 MS994328:-414 MS994774:-414 MS996704:-414 MS997088:-414 MA803374:-414 MA805853:-414 MA806405:-414 MA822458:-414 LY616263:-414 LY616802:-414 LG052084:-423 LY496531:-423 LY497206:-423 LY497818:-423 LZ238758:-423 MS884393:-423 MS994539:-423 MS996884:-423 MA806128:-423 MA822797:-423 LY616522:-423 MB407223:-423 |
TATA-Box annotation
| Distance to TSS: | 430 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | MIR675 |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
